Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MIR3180-1-201ENST00000580374 94 ntBASIC25.82■■□□□ 1.72
BRD4O60885 MIR3180-3-201ENST00000584616 94 ntBASIC25.82■■□□□ 1.72
BRD4O60885 AL121672.3-201ENST00000608644 468 ntBASIC25.82■■□□□ 1.72
BRD4O60885 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC25.82■■□□□ 1.72
BRD4O60885 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC25.82■■□□□ 1.72
BRD4O60885 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC25.82■■□□□ 1.72
BRD4O60885 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
BRD4O60885 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
BRD4O60885 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
BRD4O60885 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.82■■□□□ 1.72
BRD4O60885 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
BRD4O60885 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC25.82■■□□□ 1.72
BRD4O60885 AC011498.5-201ENST00000592027 486 ntBASIC25.82■■□□□ 1.72
BRD4O60885 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD4O60885 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC25.81■■□□□ 1.72
BRD4O60885 CROCCP3-202ENST00000420820 1947 ntBASIC25.81■■□□□ 1.72
BRD4O60885 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
BRD4O60885 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
BRD4O60885 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
BRD4O60885 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
BRD4O60885 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC25.81■■□□□ 1.72
BRD4O60885 TSSC2-201ENST00000450217 709 ntBASIC25.81■■□□□ 1.72
BRD4O60885 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC25.81■■□□□ 1.72
BRD4O60885 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
BRD4O60885 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC25.81■■□□□ 1.72
BRD4O60885 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
BRD4O60885 AC012313.10-201ENST00000623509 926 ntBASIC25.81■■□□□ 1.72
BRD4O60885 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
BRD4O60885 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
BRD4O60885 AC093503.3-201ENST00000624917 2352 ntBASIC25.8■■□□□ 1.72
BRD4O60885 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC25.8■■□□□ 1.72
BRD4O60885 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
BRD4O60885 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
BRD4O60885 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC25.8■■□□□ 1.72
BRD4O60885 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC25.8■■□□□ 1.72
BRD4O60885 GRAMD4P1-201ENST00000435181 1110 ntBASIC25.8■■□□□ 1.72
BRD4O60885 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.8■■□□□ 1.72
BRD4O60885 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.8■■□□□ 1.72
BRD4O60885 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC25.8■■□□□ 1.72
BRD4O60885 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC25.8■■□□□ 1.72
BRD4O60885 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
BRD4O60885 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD4O60885 AC016734.2-201ENST00000624325 1377 ntBASIC25.8■■□□□ 1.72
BRD4O60885 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
BRD4O60885 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC25.79■■□□□ 1.72
BRD4O60885 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.79■■□□□ 1.72
BRD4O60885 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 PRR29-207ENST00000580752 458 ntTSL 3 BASIC25.79■■□□□ 1.72
BRD4O60885 AC024243.1-201ENST00000609234 778 ntBASIC25.79■■□□□ 1.72
BRD4O60885 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 AC092119.3-201ENST00000612618 583 ntBASIC25.79■■□□□ 1.72
BRD4O60885 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC25.79■■□□□ 1.72
BRD4O60885 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC25.79■■□□□ 1.72
BRD4O60885 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
BRD4O60885 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRD4O60885 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
BRD4O60885 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.78■■□□□ 1.72
BRD4O60885 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC25.78■■□□□ 1.72
BRD4O60885 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRD4O60885 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC25.78■■□□□ 1.72
BRD4O60885 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRD4O60885 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRD4O60885 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.78■■□□□ 1.72
BRD4O60885 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC25.78■■□□□ 1.72
BRD4O60885 VPS72-207ENST00000640458 689 ntTSL 5 BASIC25.78■■□□□ 1.72
BRD4O60885 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
BRD4O60885 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms