Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
CACNB4O00305 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNB4O00305 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNB4O00305 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.46■□□□□ 0.55
CACNB4O00305 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNB4O00305 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNB4O00305 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CACNB4O00305 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNB4O00305 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CACNB4O00305 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.45■□□□□ 0.54
CACNB4O00305 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
CACNB4O00305 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CACNB4O00305 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.45■□□□□ 0.54
CACNB4O00305 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.45■□□□□ 0.54
CACNB4O00305 AP000550.4-202ENST00000639755 178 ntBASIC18.45■□□□□ 0.54
CACNB4O00305 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CACNB4O00305 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.45■□□□□ 0.54
CACNB4O00305 AC005332.7-201ENST00000614046 2005 ntBASIC18.45■□□□□ 0.54
CACNB4O00305 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CACNB4O00305 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CACNB4O00305 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNB4O00305 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CACNB4O00305 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNB4O00305 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 PCED1CP-201ENST00000419887 785 ntBASIC18.44■□□□□ 0.54
CACNB4O00305 SEC1P-202ENST00000473944 940 ntBASIC18.44■□□□□ 0.54
CACNB4O00305 FAM86EP-206ENST00000510506 987 ntBASIC18.44■□□□□ 0.54
CACNB4O00305 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNB4O00305 VENTXP5-201ENST00000523979 775 ntBASIC18.44■□□□□ 0.54
CACNB4O00305 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNB4O00305 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNB4O00305 ZNF444P1-201ENST00000559497 298 ntBASIC18.44■□□□□ 0.54
CACNB4O00305 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNB4O00305 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 AC034236.2-201ENST00000606662 1610 ntBASIC18.44■□□□□ 0.54
CACNB4O00305 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CACNB4O00305 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNB4O00305 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNB4O00305 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNB4O00305 HOXB1-202ENST00000577092 1414 ntBASIC18.43■□□□□ 0.54
CACNB4O00305 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNB4O00305 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CACNB4O00305 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNB4O00305 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.43■□□□□ 0.54
CACNB4O00305 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CACNB4O00305 AC068587.9-201ENST00000641814 219 ntBASIC18.43■□□□□ 0.54
CACNB4O00305 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CACNB4O00305 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNB4O00305 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 IER3-202ENST00000376377 1350 ntBASIC18.42■□□□□ 0.54
CACNB4O00305 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNB4O00305 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CACNB4O00305 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 UPK3BP1-201ENST00000428678 509 ntBASIC18.42■□□□□ 0.54
CACNB4O00305 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNB4O00305 AL136038.3-201ENST00000561909 1096 ntBASIC18.42■□□□□ 0.54
CACNB4O00305 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNB4O00305 AC083849.1-201ENST00000615227 514 ntBASIC18.42■□□□□ 0.54
CACNB4O00305 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CACNB4O00305 HYMAI.1-201ENST00000620949 238 ntBASIC18.42■□□□□ 0.54
CACNB4O00305 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNB4O00305 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNB4O00305 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CACNB4O00305 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNB4O00305 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms