Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 METRNL-202ENST00000570778 967 ntTSL 5 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 CES3-203ENST00000543856 3178 ntTSL 2 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 AC090114.2-201ENST00000608477 7054 ntBASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 STK25-205ENST00000405883 1904 ntTSL 2 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHKB-CPT1BH3BT56 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 CD276-203ENST00000537340 2439 ntTSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 PCDHA1-201ENST00000378133 2726 ntBASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 CASK-202ENST00000378158 3848 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 AC008741.2-201ENST00000612792 3115 ntBASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
CHKB-CPT1BH3BT56 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHKB-CPT1BH3BT56 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHKB-CPT1BH3BT56 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHKB-CPT1BH3BT56 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHKB-CPT1BH3BT56 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHKB-CPT1BH3BT56 AC005703.6-201ENST00000623265 1329 ntBASIC10.37□□□□□ -0.75
CHKB-CPT1BH3BT56 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms