Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LINC00473A8K010 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC00473A8K010 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00473A8K010 CKBP1-201ENST00000565489 1086 ntBASIC15.23■□□□□ 0.03
LINC00473A8K010 AC026271.3-201ENST00000571884 352 ntBASIC15.23■□□□□ 0.03
LINC00473A8K010 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00473A8K010 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00473A8K010 AF186192.3-201ENST00000583427 947 ntBASIC15.23■□□□□ 0.03
LINC00473A8K010 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00473A8K010 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00473A8K010 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00473A8K010 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
LINC00473A8K010 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00473A8K010 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
LINC00473A8K010 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 RCC2P3-201ENST00000418112 1537 ntBASIC15.22■□□□□ 0.03
LINC00473A8K010 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LINC00473A8K010 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 NOC2LP2-201ENST00000407594 1944 ntBASIC15.22■□□□□ 0.03
LINC00473A8K010 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LINC00473A8K010 AC011506.1-201ENST00000474329 610 ntBASIC15.22■□□□□ 0.03
LINC00473A8K010 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.22■□□□□ 0.03
LINC00473A8K010 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC00473A8K010 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC00473A8K010 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.22■□□□□ 0.03
LINC00473A8K010 AC130371.2-201ENST00000619443 611 ntBASIC15.22■□□□□ 0.03
LINC00473A8K010 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00473A8K010 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 AL162741.1-201ENST00000565563 1558 ntBASIC15.22■□□□□ 0.03
LINC00473A8K010 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LINC00473A8K010 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00473A8K010 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00473A8K010 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00473A8K010 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LINC00473A8K010 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00473A8K010 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LINC00473A8K010 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00473A8K010 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00473A8K010 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00473A8K010 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LINC00473A8K010 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
LINC00473A8K010 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 KRT8P45-201ENST00000414328 1447 ntBASIC15.21■□□□□ 0.03
LINC00473A8K010 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00473A8K010 AC068880.1-201ENST00000507289 2297 ntBASIC15.21■□□□□ 0.03
LINC00473A8K010 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 FAM207BP-201ENST00000447172 505 ntBASIC15.21■□□□□ 0.03
LINC00473A8K010 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00473A8K010 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.21■□□□□ 0.03
LINC00473A8K010 RARRES2P10-201ENST00000564312 460 ntBASIC15.21■□□□□ 0.03
LINC00473A8K010 AC073195.1-201ENST00000607241 877 ntBASIC15.21■□□□□ 0.03
LINC00473A8K010 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00473A8K010 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00473A8K010 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00473A8K010 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00473A8K010 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms