Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRRM4A7MD48 RCC2P3-201ENST00000418112 1537 ntBASIC15.07■□□□□ 0
SRRM4A7MD48 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.07■□□□□ 0
SRRM4A7MD48 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRRM4A7MD48 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.07■□□□□ 0
SRRM4A7MD48 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.06■□□□□ 0
SRRM4A7MD48 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.06■□□□□ 0
SRRM4A7MD48 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.06■□□□□ 0
SRRM4A7MD48 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 ABHD17AP1-201ENST00000358206 933 ntBASIC15.06■□□□□ 0
SRRM4A7MD48 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SRRM4A7MD48 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.06■□□□□ 0
SRRM4A7MD48 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.06■□□□□ 0
SRRM4A7MD48 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.06■□□□□ 0
SRRM4A7MD48 AC008622.2-201ENST00000617006 1229 ntBASIC15.06■□□□□ 0
SRRM4A7MD48 AC113410.3-201ENST00000623366 203 ntBASIC15.06■□□□□ 0
SRRM4A7MD48 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SRRM4A7MD48 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.06■□□□□ 0
SRRM4A7MD48 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SRRM4A7MD48 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.06■□□□□ 0
SRRM4A7MD48 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SRRM4A7MD48 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.05■□□□□ 0
SRRM4A7MD48 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.05■□□□□ 0
SRRM4A7MD48 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SRRM4A7MD48 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRRM4A7MD48 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRRM4A7MD48 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.05■□□□□ 0
SRRM4A7MD48 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
SRRM4A7MD48 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SRRM4A7MD48 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SRRM4A7MD48 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SRRM4A7MD48 NUDT16P1-203ENST00000513809 620 ntBASIC15.05■□□□□ -0
SRRM4A7MD48 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.05■□□□□ -0
SRRM4A7MD48 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.05■□□□□ -0
SRRM4A7MD48 AC233702.5-201ENST00000584107 538 ntBASIC15.05■□□□□ -0
SRRM4A7MD48 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.05■□□□□ -0
SRRM4A7MD48 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.05■□□□□ -0
SRRM4A7MD48 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SRRM4A7MD48 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SRRM4A7MD48 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.05■□□□□ -0
SRRM4A7MD48 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SRRM4A7MD48 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SRRM4A7MD48 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SRRM4A7MD48 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 AL354751.1-201ENST00000412768 1863 ntBASIC15.04■□□□□ -0
SRRM4A7MD48 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SRRM4A7MD48 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SRRM4A7MD48 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 AC096733.2-201ENST00000609937 1394 ntBASIC15.04■□□□□ -0
SRRM4A7MD48 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.04■□□□□ -0
SRRM4A7MD48 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.04■□□□□ -0
SRRM4A7MD48 Z99916.2-201ENST00000604037 246 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms