Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 AC060766.5-201ENST00000590539 871 ntBASIC20.21■□□□□ 0.83
CCDC66A2RUB6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.21■□□□□ 0.83
CCDC66A2RUB6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 PCDHA12-202ENST00000613593 2588 ntBASIC20.21■□□□□ 0.83
CCDC66A2RUB6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 FER1L4-210ENST00000615531 5998 ntBASIC20.21■□□□□ 0.83
CCDC66A2RUB6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC66A2RUB6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 KRT18P16-201ENST00000510337 1294 ntBASIC20.2■□□□□ 0.82
CCDC66A2RUB6 PNMA6B-201ENST00000538162 1200 ntBASIC20.2■□□□□ 0.82
CCDC66A2RUB6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC66A2RUB6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 FP475955.4-201ENST00000623131 1990 ntBASIC20.19■□□□□ 0.82
CCDC66A2RUB6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.19■□□□□ 0.82
CCDC66A2RUB6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.19■□□□□ 0.82
CCDC66A2RUB6 AC120498.8-201ENST00000614275 531 ntBASIC20.19■□□□□ 0.82
CCDC66A2RUB6 AL121829.2-201ENST00000620908 328 ntBASIC20.19■□□□□ 0.82
CCDC66A2RUB6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC66A2RUB6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 AC008894.3-201ENST00000624324 3103 ntBASIC20.18■□□□□ 0.82
CCDC66A2RUB6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms