Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.27■■□□□ 1
SYCE3A1L190 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.27■■□□□ 1
SYCE3A1L190 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SYCE3A1L190 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.27■■□□□ 1
SYCE3A1L190 BX276092.2-201ENST00000417668 665 ntBASIC21.27■■□□□ 1
SYCE3A1L190 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.27■■□□□ 1
SYCE3A1L190 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.27■■□□□ 1
SYCE3A1L190 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.27■■□□□ 1
SYCE3A1L190 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.27■■□□□ 1
SYCE3A1L190 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.27■■□□□ 1
SYCE3A1L190 SIRPAP1-201ENST00000448467 1770 ntBASIC21.27■■□□□ 1
SYCE3A1L190 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
SYCE3A1L190 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SYCE3A1L190 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYCE3A1L190 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.27■■□□□ 1
SYCE3A1L190 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SYCE3A1L190 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SYCE3A1L190 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SYCE3A1L190 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SYCE3A1L190 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SYCE3A1L190 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SYCE3A1L190 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SYCE3A1L190 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.26■□□□□ 0.99
SYCE3A1L190 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.26■□□□□ 0.99
SYCE3A1L190 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.26■□□□□ 0.99
SYCE3A1L190 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SYCE3A1L190 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.26■□□□□ 0.99
SYCE3A1L190 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.26■□□□□ 0.99
SYCE3A1L190 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.26■□□□□ 0.99
SYCE3A1L190 AC087623.3-201ENST00000607047 1098 ntBASIC21.26■□□□□ 0.99
SYCE3A1L190 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SYCE3A1L190 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.26■□□□□ 0.99
SYCE3A1L190 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.26■□□□□ 0.99
SYCE3A1L190 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SYCE3A1L190 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.26■□□□□ 0.99
SYCE3A1L190 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYCE3A1L190 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
SYCE3A1L190 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SYCE3A1L190 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
SYCE3A1L190 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.25■□□□□ 0.99
SYCE3A1L190 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.25■□□□□ 0.99
SYCE3A1L190 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 SLC25A6P5-201ENST00000435663 894 ntBASIC21.25■□□□□ 0.99
SYCE3A1L190 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.25■□□□□ 0.99
SYCE3A1L190 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.25■□□□□ 0.99
SYCE3A1L190 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.25■□□□□ 0.99
SYCE3A1L190 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.25■□□□□ 0.99
SYCE3A1L190 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.25■□□□□ 0.99
SYCE3A1L190 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.25■□□□□ 0.99
SYCE3A1L190 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.25■□□□□ 0.99
SYCE3A1L190 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.25■□□□□ 0.99
SYCE3A1L190 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYCE3A1L190 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYCE3A1L190 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYCE3A1L190 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYCE3A1L190 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.24■□□□□ 0.99
SYCE3A1L190 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.24■□□□□ 0.99
SYCE3A1L190 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SYCE3A1L190 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYCE3A1L190 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYCE3A1L190 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SYCE3A1L190 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SYCE3A1L190 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYCE3A1L190 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYCE3A1L190 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.24■□□□□ 0.99
SYCE3A1L190 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.24■□□□□ 0.99
SYCE3A1L190 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms