Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AC135050.7-201ENST00000624508 2218 ntBASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CA15P1-201ENST00000481698 905 ntBASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 FITM1-202ENST00000559294 800 ntBASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.52■□□□□ 0.24
IGKV1D-43A0A0B4J1Z2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 BICD1-207ENST00000551848 1962 ntBASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MIR1238-201ENST00000408483 83 ntBASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MCCD1P1-208ENST00000445732 328 ntBASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AL023803.3-201ENST00000615559 522 ntBASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KRT8P45-201ENST00000414328 1447 ntBASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AL596275.1-201ENST00000423464 877 ntBASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KRT8P9-201ENST00000558927 1449 ntBASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms