Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 AC079602.3-201ENST00000623931 403 ntBASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRGV5A0A0B4J1U4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 AL391807.1-203ENST00000604392 2365 ntBASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 HEIH-201ENST00000623091 1652 ntBASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.75■□□□□ 0.27
TRGV5A0A0B4J1U4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 HLA-F-220ENST00000434407 884 ntBASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 KRT18P56-201ENST00000507275 550 ntBASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRGV5A0A0B4J1U4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 MIR3180-4-201ENST00000582223 153 ntBASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRGV5A0A0B4J1U4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 AL161938.1-201ENST00000569833 2180 ntBASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 Z98044.1-201ENST00000632503 1764 ntBASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms