Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 AC116562.2-201ENST00000507042 360 ntBASIC21.38■■□□□ 1.01
CLIC4Q9Y696 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 AC113410.3-201ENST00000623366 203 ntBASIC21.38■■□□□ 1.01
CLIC4Q9Y696 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 AL135905.2-201ENST00000584934 1404 ntBASIC21.38■■□□□ 1.01
CLIC4Q9Y696 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 NUDT16P1-203ENST00000513809 620 ntBASIC21.37■■□□□ 1.01
CLIC4Q9Y696 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 AC008556.1-201ENST00000610908 2040 ntBASIC21.37■■□□□ 1.01
CLIC4Q9Y696 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 AL133373.2-201ENST00000623187 2828 ntBASIC21.37■■□□□ 1.01
CLIC4Q9Y696 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLIC4Q9Y696 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 ABHD17AP1-201ENST00000358206 933 ntBASIC21.36■■□□□ 1.01
CLIC4Q9Y696 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.36■■□□□ 1.01
CLIC4Q9Y696 AC096733.2-201ENST00000609937 1394 ntBASIC21.36■■□□□ 1.01
CLIC4Q9Y696 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 UBE2SP1-201ENST00000450587 669 ntBASIC21.35■■□□□ 1.01
CLIC4Q9Y696 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLIC4Q9Y696 NOC2LP1-202ENST00000452600 2235 ntBASIC21.35■■□□□ 1.01
CLIC4Q9Y696 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 AC020763.4-201ENST00000623414 4170 ntBASIC21.34■■□□□ 1.01
CLIC4Q9Y696 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms