Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 AC116562.2-201ENST00000507042 360 ntBASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 NUDT16P1-203ENST00000513809 620 ntBASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 HEIH-201ENST00000623091 1652 ntBASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 MESTP1-201ENST00000404287 994 ntBASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 DGCR10-201ENST00000609839 495 ntBASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 AL049637.2-201ENST00000641778 930 ntBASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA11Q9Y5H2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGA11Q9Y5H2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGA11Q9Y5H2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGA11Q9Y5H2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHGA11Q9Y5H2 AL133373.2-201ENST00000623187 2828 ntBASIC18.14■□□□□ 0.5
PCDHGA11Q9Y5H2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 AC113410.3-201ENST00000623366 203 ntBASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 ANO7L1-203ENST00000602586 1720 ntBASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 KRT8P32-201ENST00000512863 1461 ntBASIC18.14■□□□□ 0.49
PCDHGA11Q9Y5H2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms