Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 AC083849.1-201ENST00000615227 514 ntBASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB2Q9Y5E7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 FP475955.4-201ENST00000623131 1990 ntBASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 ZNF444P1-201ENST00000559497 298 ntBASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 AC024243.1-201ENST00000609234 778 ntBASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 TNXA-203ENST00000507684 2038 ntBASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 IRX1P1-201ENST00000438849 1838 ntBASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB2Q9Y5E7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 LINC01311-201ENST00000565162 1445 ntBASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 FEM1AP3-201ENST00000403722 1741 ntBASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 AL049812.1-201ENST00000432563 2267 ntBASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 VENTXP5-201ENST00000523979 775 ntBASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 AL136038.3-201ENST00000561909 1096 ntBASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 AC116407.4-201ENST00000623319 1061 ntBASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB2Q9Y5E7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 RASA4DP-201ENST00000460726 1199 ntBASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms