Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 AL512353.2-201ENST00000448759 1962 ntBASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB9Q9Y5E1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 GPAT2P1-201ENST00000444924 1672 ntBASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 AL691432.3-201ENST00000621860 400 ntBASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB9Q9Y5E1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 AL671277.2-201ENST00000458060 996 ntBASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 MIR4674-201ENST00000582457 87 ntBASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB9Q9Y5E1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 AL023284.2-201ENST00000405850 579 ntBASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms