Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.79■□□□□ 0.6
PKP3Q9Y446 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PKP3Q9Y446 CROCCP3-202ENST00000420820 1947 ntBASIC18.78■□□□□ 0.6
PKP3Q9Y446 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.78■□□□□ 0.6
PKP3Q9Y446 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.78■□□□□ 0.6
PKP3Q9Y446 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.78■□□□□ 0.6
PKP3Q9Y446 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.78■□□□□ 0.6
PKP3Q9Y446 AC092338.2-201ENST00000568827 1415 ntBASIC18.78■□□□□ 0.6
PKP3Q9Y446 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 AP003041.3-201ENST00000527151 707 ntBASIC18.78■□□□□ 0.6
PKP3Q9Y446 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.78■□□□□ 0.6
PKP3Q9Y446 AC010947.1-201ENST00000623454 693 ntBASIC18.78■□□□□ 0.6
PKP3Q9Y446 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PKP3Q9Y446 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PKP3Q9Y446 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PKP3Q9Y446 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 AC093525.10-201ENST00000625130 1569 ntBASIC18.77■□□□□ 0.6
PKP3Q9Y446 GPAT2P1-201ENST00000444924 1672 ntBASIC18.77■□□□□ 0.6
PKP3Q9Y446 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 AL109659.2-201ENST00000606809 1674 ntBASIC18.77■□□□□ 0.6
PKP3Q9Y446 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PKP3Q9Y446 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 AL023284.2-201ENST00000405850 579 ntBASIC18.77■□□□□ 0.6
PKP3Q9Y446 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PKP3Q9Y446 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PKP3Q9Y446 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PKP3Q9Y446 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PKP3Q9Y446 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PKP3Q9Y446 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PKP3Q9Y446 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PKP3Q9Y446 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PKP3Q9Y446 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PKP3Q9Y446 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 AC004408.2-201ENST00000623613 2777 ntBASIC18.76■□□□□ 0.59
PKP3Q9Y446 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 AC093503.3-201ENST00000624917 2352 ntBASIC18.76■□□□□ 0.59
PKP3Q9Y446 Z98044.1-201ENST00000632503 1764 ntBASIC18.76■□□□□ 0.59
PKP3Q9Y446 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 AC087499.1-201ENST00000418141 1075 ntBASIC18.76■□□□□ 0.59
PKP3Q9Y446 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 AC007663.1-201ENST00000438948 1240 ntBASIC18.76■□□□□ 0.59
PKP3Q9Y446 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 AC010653.2-201ENST00000623505 997 ntBASIC18.76■□□□□ 0.59
PKP3Q9Y446 AC073912.3-201ENST00000624414 853 ntBASIC18.76■□□□□ 0.59
PKP3Q9Y446 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.76■□□□□ 0.59
PKP3Q9Y446 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP3Q9Y446 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms