Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 AC096733.2-201ENST00000609937 1394 ntBASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 MYC-208ENST00000641036 567 ntBASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS29Q9UBQ0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 AL499627.1-201ENST00000569373 2188 ntBASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 SLC25A1P4-201ENST00000567977 778 ntBASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 AC113410.3-201ENST00000623366 203 ntBASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 AL049637.2-201ENST00000641778 930 ntBASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 AC079598.2-202ENST00000546624 1451 ntBASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS29Q9UBQ0 BICD1-207ENST00000551848 1962 ntBASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VPS29Q9UBQ0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 AC112777.1-201ENST00000540175 1423 ntBASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 MFAP1P1-201ENST00000442257 1255 ntBASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 AC097488.1-201ENST00000507834 756 ntBASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VPS29Q9UBQ0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms