Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PPARGC1AQ9UBK2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPARGC1AQ9UBK2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPARGC1AQ9UBK2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.5■□□□□ 0.71
PPARGC1AQ9UBK2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPARGC1AQ9UBK2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 AC090340.1-201ENST00000620778 4980 ntBASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 AC128688.1-201ENST00000487626 519 ntBASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 AC010653.2-201ENST00000623505 997 ntBASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 AC097493.4-201ENST00000641197 219 ntBASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.49■□□□□ 0.71
PPARGC1AQ9UBK2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 LINC01568-207ENST00000641790 1380 ntBASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.48■□□□□ 0.71
PPARGC1AQ9UBK2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 AC211429.1-201ENST00000415277 523 ntBASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 AC007663.1-201ENST00000438948 1240 ntBASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 AC133561.5-201ENST00000635547 218 ntBASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 KRT18P22-201ENST00000402024 1347 ntBASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPARGC1AQ9UBK2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms