Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 AC092118.2-201ENST00000613495 667 ntBASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 AC138028.4-201ENST00000564984 1845 ntBASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC3Q9NUV7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SPTLC3Q9NUV7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 AL137784.2-201ENST00000607332 1000 ntBASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 AL121832.2-201ENST00000610979 668 ntBASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 AL121906.2-201ENST00000621597 723 ntBASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 AC092368.3-202ENST00000574180 1591 ntBASIC20.59■□□□□ 0.89
SPTLC3Q9NUV7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 GUSBP6-202ENST00000438529 1198 ntBASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SPTLC3Q9NUV7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC3Q9NUV7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.57■□□□□ 0.88
SPTLC3Q9NUV7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.57■□□□□ 0.88
SPTLC3Q9NUV7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC3Q9NUV7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC3Q9NUV7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC3Q9NUV7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC3Q9NUV7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms