Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 AC067930.6-201ENST00000623257 4947 ntBASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 AL023806.1-201ENST00000603994 1649 ntBASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 STK40-201ENST00000359297 4837 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 AC132872.4-202ENST00000622924 2756 ntBASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 AL137784.3-201ENST00000623858 2288 ntBASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 PP12613-201ENST00000424958 2230 ntBASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 AC093010.1-201ENST00000473625 1624 ntBASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42SE1Q9NRR8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms