Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRTM1Q9HBL6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRTM1Q9HBL6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRTM1Q9HBL6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 AL499627.1-201ENST00000569373 2188 ntBASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 AC011298.2-201ENST00000617989 482 ntBASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 CR392000.1-201ENST00000624770 1228 ntBASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 AL031985.4-201ENST00000642138 673 ntBASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRTM1Q9HBL6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 AC026271.3-201ENST00000571884 352 ntBASIC18■□□□□ 0.47
LRTM1Q9HBL6 MIR4651-201ENST00000582622 73 ntBASIC18■□□□□ 0.47
LRTM1Q9HBL6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18■□□□□ 0.47
LRTM1Q9HBL6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRTM1Q9HBL6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 AC018470.1-201ENST00000624790 3129 ntBASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms