Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 AC139530.3-201ENST00000620344 690 ntBASIC20.44■□□□□ 0.86
HIPK3Q9H422 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 AF238378.1-201ENST00000526806 358 ntBASIC20.43■□□□□ 0.86
HIPK3Q9H422 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 AF228730.7-201ENST00000641842 219 ntBASIC20.43■□□□□ 0.86
HIPK3Q9H422 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 Z82202.1-201ENST00000623446 1880 ntBASIC20.43■□□□□ 0.86
HIPK3Q9H422 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK3Q9H422 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK3Q9H422 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 RN7SL606P-201ENST00000472779 293 ntBASIC20.42■□□□□ 0.86
HIPK3Q9H422 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 AP001005.1-201ENST00000571755 1248 ntBASIC20.42■□□□□ 0.86
HIPK3Q9H422 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.42■□□□□ 0.86
HIPK3Q9H422 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK3Q9H422 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.42■□□□□ 0.86
HIPK3Q9H422 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 MIR3180-4-201ENST00000582223 153 ntBASIC20.41■□□□□ 0.86
HIPK3Q9H422 TP73-AS1-207ENST00000624167 988 ntBASIC20.41■□□□□ 0.86
HIPK3Q9H422 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.41■□□□□ 0.86
HIPK3Q9H422 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK3Q9H422 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK3Q9H422 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HIPK3Q9H422 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK3Q9H422 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK3Q9H422 MIR574-201ENST00000385209 96 ntBASIC20.4■□□□□ 0.86
HIPK3Q9H422 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms