Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.71
DDX47Q9H0S4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX47Q9H0S4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
DDX47Q9H0S4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DDX47Q9H0S4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.52■□□□□ 0.71
DDX47Q9H0S4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 AL138781.1-201ENST00000566567 1274 ntBASIC19.51■□□□□ 0.71
DDX47Q9H0S4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.51■□□□□ 0.71
DDX47Q9H0S4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX47Q9H0S4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX47Q9H0S4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 NBPF21P-201ENST00000425093 1451 ntBASIC19.49■□□□□ 0.71
DDX47Q9H0S4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.49■□□□□ 0.71
DDX47Q9H0S4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 AC020916.1-201ENST00000587762 1774 ntBASIC19.49■□□□□ 0.71
DDX47Q9H0S4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX47Q9H0S4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms