Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 AC026271.3-201ENST00000571884 352 ntBASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 AC233702.5-201ENST00000584107 538 ntBASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 AC009113.1-201ENST00000570267 2443 ntBASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 ANO7L1-203ENST00000602586 1720 ntBASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
YIPF4Q9BSR8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 MESTP1-201ENST00000404287 994 ntBASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
YIPF4Q9BSR8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 AC211429.1-201ENST00000415277 523 ntBASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 LINC01023-201ENST00000606054 436 ntBASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 AC113410.3-201ENST00000623366 203 ntBASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 AC005082.1-201ENST00000413042 2259 ntBASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
YIPF4Q9BSR8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms