Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 Z85996.1-201ENST00000494644 937 ntBASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDHD3Q9BSH5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.81■□□□□ 0.12
HDHD3Q9BSH5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 AL355802.2-201ENST00000402069 882 ntBASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 MTDHP1-201ENST00000605323 784 ntBASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 AC069544.1-201ENST00000609399 999 ntBASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HDHD3Q9BSH5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms