Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBA1CQ9BQE3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 AL512353.2-201ENST00000448759 1962 ntBASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 AL353807.1-201ENST00000427475 662 ntBASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1CQ9BQE3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 KRT17P2-201ENST00000300992 1314 ntBASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TUBA1CQ9BQE3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TUBA1CQ9BQE3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBA1CQ9BQE3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBA1CQ9BQE3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
TUBA1CQ9BQE3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms