Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.47■□□□□ 0.07
S1PR3Q99500 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
S1PR3Q99500 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR3Q99500 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR3Q99500 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.46■□□□□ 0.07
S1PR3Q99500 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
S1PR3Q99500 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
S1PR3Q99500 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 AC004980.1-204ENST00000429707 299 ntBASIC15.46■□□□□ 0.07
S1PR3Q99500 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.46■□□□□ 0.07
S1PR3Q99500 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
S1PR3Q99500 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR3Q99500 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.46■□□□□ 0.07
S1PR3Q99500 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR3Q99500 AP006294.2-201ENST00000641667 209 ntBASIC15.46■□□□□ 0.07
S1PR3Q99500 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR3Q99500 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
S1PR3Q99500 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
S1PR3Q99500 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.46■□□□□ 0.06
S1PR3Q99500 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
S1PR3Q99500 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
S1PR3Q99500 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.46■□□□□ 0.06
S1PR3Q99500 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
S1PR3Q99500 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.45■□□□□ 0.06
S1PR3Q99500 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.45■□□□□ 0.06
S1PR3Q99500 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
S1PR3Q99500 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.45■□□□□ 0.06
S1PR3Q99500 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
S1PR3Q99500 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.45■□□□□ 0.06
S1PR3Q99500 AC004951.3-201ENST00000418645 1148 ntBASIC15.45■□□□□ 0.06
S1PR3Q99500 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.45■□□□□ 0.06
S1PR3Q99500 AC026271.3-201ENST00000571884 352 ntBASIC15.45■□□□□ 0.06
S1PR3Q99500 AF186192.3-201ENST00000583427 947 ntBASIC15.45■□□□□ 0.06
S1PR3Q99500 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.45■□□□□ 0.06
S1PR3Q99500 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.45■□□□□ 0.06
S1PR3Q99500 AC073195.1-201ENST00000607241 877 ntBASIC15.45■□□□□ 0.06
S1PR3Q99500 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR3Q99500 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.45■□□□□ 0.06
S1PR3Q99500 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR3Q99500 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
S1PR3Q99500 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
S1PR3Q99500 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
S1PR3Q99500 AC090164.3-201ENST00000610780 2143 ntBASIC15.44■□□□□ 0.06
S1PR3Q99500 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
S1PR3Q99500 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
S1PR3Q99500 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
S1PR3Q99500 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
S1PR3Q99500 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
S1PR3Q99500 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.44■□□□□ 0.06
S1PR3Q99500 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms