Protein–RNA interactions for Protein: Q96SJ8

TSPAN18, Tetraspanin-18, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18Q96SJ8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 HLA-F-220ENST00000434407 884 ntBASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 PVRIG2P-201ENST00000435460 978 ntBASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 FAM86EP-206ENST00000510506 987 ntBASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TSPAN18Q96SJ8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 KRT8P50-201ENST00000562022 1438 ntBASIC20.02■□□□□ 0.79
TSPAN18Q96SJ8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 AC093525.10-201ENST00000625130 1569 ntBASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 AL157888.1-201ENST00000631930 593 ntBASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN18Q96SJ8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 AC083849.1-201ENST00000615227 514 ntBASIC20■□□□□ 0.79
TSPAN18Q96SJ8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20■□□□□ 0.79
TSPAN18Q96SJ8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 AP000550.4-202ENST00000639755 178 ntBASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN18Q96SJ8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 AL136038.4-201ENST00000603606 1261 ntBASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN18Q96SJ8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms