Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
SLC46A1Q96NT5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 AC093484.2-201ENST00000580996 2166 ntBASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 AC036111.1-201ENST00000533973 1582 ntBASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 AC079602.3-201ENST00000623931 403 ntBASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC46A1Q96NT5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 TSPY19P-201ENST00000418461 509 ntBASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 TSPY18P-201ENST00000441642 509 ntBASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 SEC1P-202ENST00000473944 940 ntBASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 MIR3180-5-201ENST00000583743 153 ntBASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 IFNL4P1-201ENST00000607083 540 ntBASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 KRT18P1-202ENST00000452408 1331 ntBASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 SDHAP1-207ENST00000440850 2000 ntBASIC17.88■□□□□ 0.45
SLC46A1Q96NT5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 MIR662-201ENST00000384847 95 ntBASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 TSPY22P-201ENST00000427496 604 ntBASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC46A1Q96NT5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC46A1Q96NT5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC46A1Q96NT5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC46A1Q96NT5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC46A1Q96NT5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms