Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 FAM8A6P-201ENST00000407496 1135 ntBASIC18.22■□□□□ 0.51
LINC00615Q96LM1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 HOMER2P1-201ENST00000455653 964 ntBASIC18.22■□□□□ 0.51
LINC00615Q96LM1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LINC00615Q96LM1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 STARP1-201ENST00000397973 869 ntBASIC18.21■□□□□ 0.51
LINC00615Q96LM1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 MIR3917-201ENST00000580971 93 ntBASIC18.21■□□□□ 0.51
LINC00615Q96LM1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00615Q96LM1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
LINC00615Q96LM1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 AC034232.1-201ENST00000506026 1064 ntBASIC18.2■□□□□ 0.5
LINC00615Q96LM1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 AC010240.3-201ENST00000607688 395 ntBASIC18.2■□□□□ 0.5
LINC00615Q96LM1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 MYLKP1-201ENST00000509077 1580 ntBASIC18.2■□□□□ 0.5
LINC00615Q96LM1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00615Q96LM1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.19■□□□□ 0.5
LINC00615Q96LM1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00615Q96LM1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms