Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
GRAMD1AQ96CP6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 AL512353.2-201ENST00000448759 1962 ntBASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 UNC93B2-201ENST00000285383 730 ntBASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 AP002982.1-201ENST00000492365 877 ntBASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 NUDT16P1-203ENST00000513809 620 ntBASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRAMD1AQ96CP6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 FAM197Y1-201ENST00000421178 764 ntBASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 AC005363.2-201ENST00000618631 242 ntBASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRAMD1AQ96CP6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GRAMD1AQ96CP6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GRAMD1AQ96CP6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms