Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF428Q96B54 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC24.04■■□□□ 1.44
ZNF428Q96B54 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF428Q96B54 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF428Q96B54 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC24.04■■□□□ 1.44
ZNF428Q96B54 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF428Q96B54 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZNF428Q96B54 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ZNF428Q96B54 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZNF428Q96B54 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ZNF428Q96B54 AC009947.2-201ENST00000444014 672 ntBASIC24.03■■□□□ 1.44
ZNF428Q96B54 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ZNF428Q96B54 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZNF428Q96B54 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ZNF428Q96B54 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.03■■□□□ 1.44
ZNF428Q96B54 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZNF428Q96B54 AC112777.1-201ENST00000540175 1423 ntBASIC24.02■■□□□ 1.44
ZNF428Q96B54 HOXB1-202ENST00000577092 1414 ntBASIC24.02■■□□□ 1.44
ZNF428Q96B54 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZNF428Q96B54 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZNF428Q96B54 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZNF428Q96B54 AC092647.4-201ENST00000457211 535 ntBASIC24.02■■□□□ 1.44
ZNF428Q96B54 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZNF428Q96B54 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 CR769767.2-201ENST00000622735 460 ntBASIC24.02■■□□□ 1.44
ZNF428Q96B54 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZNF428Q96B54 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZNF428Q96B54 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 AC034236.2-201ENST00000606662 1610 ntBASIC24.02■■□□□ 1.44
ZNF428Q96B54 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
ZNF428Q96B54 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.01■■□□□ 1.43
ZNF428Q96B54 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZNF428Q96B54 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
ZNF428Q96B54 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
ZNF428Q96B54 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC24■■□□□ 1.43
ZNF428Q96B54 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
ZNF428Q96B54 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24■■□□□ 1.43
ZNF428Q96B54 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 AP000593.1-201ENST00000393668 712 ntBASIC24■■□□□ 1.43
ZNF428Q96B54 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
ZNF428Q96B54 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24■■□□□ 1.43
ZNF428Q96B54 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24■■□□□ 1.43
ZNF428Q96B54 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 AIRN-201ENST00000601203 4374 ntBASIC24■■□□□ 1.43
ZNF428Q96B54 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZNF428Q96B54 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZNF428Q96B54 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZNF428Q96B54 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.99■■□□□ 1.43
ZNF428Q96B54 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
ZNF428Q96B54 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.99■■□□□ 1.43
ZNF428Q96B54 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms