Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 RASA4DP-201ENST00000460726 1199 ntBASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 AC034232.1-201ENST00000506026 1064 ntBASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 AC024243.1-201ENST00000609234 778 ntBASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 AC068587.9-201ENST00000641814 219 ntBASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0A1Q93050 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 HBZP1-201ENST00000354915 429 ntBASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 SPDYE13P-201ENST00000445314 798 ntBASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP6V0A1Q93050 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 MIR564-202ENST00000385049 94 ntBASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 DUSP5P1-201ENST00000441325 1139 ntBASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 AC092597.1-201ENST00000487352 616 ntBASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0A1Q93050 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP6V0A1Q93050 AL049812.1-201ENST00000432563 2267 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms