Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 LINC01238-205ENST00000567549 1107 ntBASIC18.9■□□□□ 0.62
CHD5Q8TDI0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 AC112497.1-201ENST00000624824 639 ntBASIC18.9■□□□□ 0.62
CHD5Q8TDI0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD5Q8TDI0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD5Q8TDI0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD5Q8TDI0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD5Q8TDI0 AC005332.1-201ENST00000577698 1310 ntBASIC18.89■□□□□ 0.61
CHD5Q8TDI0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHD5Q8TDI0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 AC034232.1-201ENST00000506026 1064 ntBASIC18.88■□□□□ 0.61
CHD5Q8TDI0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHD5Q8TDI0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.87■□□□□ 0.61
CHD5Q8TDI0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 BX664615.1-201ENST00000443558 458 ntBASIC18.87■□□□□ 0.61
CHD5Q8TDI0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 AC005082.1-201ENST00000413042 2259 ntBASIC18.87■□□□□ 0.61
CHD5Q8TDI0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHD5Q8TDI0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 AL391807.1-203ENST00000604392 2365 ntBASIC18.86■□□□□ 0.61
CHD5Q8TDI0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms