Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 AC141586.3-201ENST00000562166 1838 ntBASIC21.18■□□□□ 0.98
RETREG2Q8NC44 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.18■□□□□ 0.98
RETREG2Q8NC44 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 AL450487.1-201ENST00000426799 995 ntBASIC21.18■□□□□ 0.98
RETREG2Q8NC44 TSPY21P-201ENST00000433481 731 ntBASIC21.18■□□□□ 0.98
RETREG2Q8NC44 KRT18P38-201ENST00000449496 1282 ntBASIC21.18■□□□□ 0.98
RETREG2Q8NC44 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 AL136038.3-201ENST00000561909 1096 ntBASIC21.18■□□□□ 0.98
RETREG2Q8NC44 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.18■□□□□ 0.98
RETREG2Q8NC44 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.17■□□□□ 0.98
RETREG2Q8NC44 DUSP5P1-201ENST00000441325 1139 ntBASIC21.17■□□□□ 0.98
RETREG2Q8NC44 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RETREG2Q8NC44 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 SDHAP1-207ENST00000440850 2000 ntBASIC21.16■□□□□ 0.98
RETREG2Q8NC44 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RETREG2Q8NC44 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 AL161938.1-201ENST00000569833 2180 ntBASIC21.15■□□□□ 0.98
RETREG2Q8NC44 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms