Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.89■□□□□ 0.77
TTC39CQ8N584 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.89■□□□□ 0.77
TTC39CQ8N584 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39CQ8N584 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39CQ8N584 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39CQ8N584 AC141257.4-201ENST00000634557 245 ntBASIC19.89■□□□□ 0.77
TTC39CQ8N584 AC136944.6-201ENST00000634818 245 ntBASIC19.89■□□□□ 0.77
TTC39CQ8N584 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TTC39CQ8N584 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39CQ8N584 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39CQ8N584 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TTC39CQ8N584 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39CQ8N584 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39CQ8N584 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 TERF1P1-201ENST00000311003 1181 ntBASIC19.88■□□□□ 0.77
TTC39CQ8N584 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 AC009065.1-201ENST00000564055 1225 ntBASIC19.88■□□□□ 0.77
TTC39CQ8N584 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 MIR3180-4-201ENST00000582223 153 ntBASIC19.88■□□□□ 0.77
TTC39CQ8N584 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 AC112497.1-201ENST00000624824 639 ntBASIC19.88■□□□□ 0.77
TTC39CQ8N584 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39CQ8N584 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39CQ8N584 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 BX664615.1-201ENST00000443558 458 ntBASIC19.87■□□□□ 0.77
TTC39CQ8N584 AC009947.2-201ENST00000444014 672 ntBASIC19.87■□□□□ 0.77
TTC39CQ8N584 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39CQ8N584 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.87■□□□□ 0.77
TTC39CQ8N584 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 AC073508.3-201ENST00000619697 1419 ntBASIC19.86■□□□□ 0.77
TTC39CQ8N584 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 KRT18P23-201ENST00000435622 1283 ntBASIC19.86■□□□□ 0.77
TTC39CQ8N584 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.86■□□□□ 0.77
TTC39CQ8N584 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TTC39CQ8N584 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TTC39CQ8N584 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.85■□□□□ 0.77
TTC39CQ8N584 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
TTC39CQ8N584 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TTC39CQ8N584 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TTC39CQ8N584 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
TTC39CQ8N584 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.85■□□□□ 0.77
TTC39CQ8N584 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.85■□□□□ 0.77
TTC39CQ8N584 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms