Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.19■■□□□ 1.3
SMC5Q8IY18 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.19■■□□□ 1.3
SMC5Q8IY18 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 MIR564-202ENST00000385049 94 ntBASIC23.19■■□□□ 1.3
SMC5Q8IY18 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.19■■□□□ 1.3
SMC5Q8IY18 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.19■■□□□ 1.3
SMC5Q8IY18 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.19■■□□□ 1.3
SMC5Q8IY18 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SMC5Q8IY18 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMC5Q8IY18 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMC5Q8IY18 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMC5Q8IY18 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMC5Q8IY18 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMC5Q8IY18 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 AC097488.1-201ENST00000507834 756 ntBASIC23.18■■□□□ 1.3
SMC5Q8IY18 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMC5Q8IY18 MYLKP1-201ENST00000509077 1580 ntBASIC23.18■■□□□ 1.3
SMC5Q8IY18 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC23.18■■□□□ 1.3
SMC5Q8IY18 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMC5Q8IY18 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMC5Q8IY18 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMC5Q8IY18 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMC5Q8IY18 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMC5Q8IY18 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 AP001412.1-201ENST00000608405 714 ntBASIC23.17■■□□□ 1.3
SMC5Q8IY18 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMC5Q8IY18 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMC5Q8IY18 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SMC5Q8IY18 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.16■■□□□ 1.3
SMC5Q8IY18 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.16■■□□□ 1.3
SMC5Q8IY18 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.16■■□□□ 1.3
SMC5Q8IY18 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.16■■□□□ 1.3
SMC5Q8IY18 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.16■■□□□ 1.3
SMC5Q8IY18 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.16■■□□□ 1.3
SMC5Q8IY18 MIR4674-201ENST00000582457 87 ntBASIC23.16■■□□□ 1.3
SMC5Q8IY18 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMC5Q8IY18 AC135776.1-201ENST00000319817 2481 ntBASIC23.16■■□□□ 1.3
SMC5Q8IY18 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.16■■□□□ 1.3
SMC5Q8IY18 NOC2LP2-201ENST00000407594 1944 ntBASIC23.16■■□□□ 1.3
SMC5Q8IY18 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 AC093677.2-201ENST00000600169 1863 ntBASIC23.15■■□□□ 1.3
SMC5Q8IY18 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMC5Q8IY18 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SMC5Q8IY18 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SMC5Q8IY18 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SMC5Q8IY18 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms