Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.46■■□□□ 1.03
SH3RF1Q7Z6J0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3RF1Q7Z6J0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF1Q7Z6J0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 AC112907.2-201ENST00000448639 330 ntBASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF1Q7Z6J0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 KRT8P45-201ENST00000414328 1447 ntBASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF1Q7Z6J0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 AP003041.3-201ENST00000527151 707 ntBASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 AL160286.2-201ENST00000567150 934 ntBASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 HYMAI.1-201ENST00000620949 238 ntBASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF1Q7Z6J0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 AP000347.1-202ENST00000435868 847 ntBASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 ZNF444P1-201ENST00000559497 298 ntBASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF1Q7Z6J0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms