Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 GCSHP5-201ENST00000443090 522 ntBASIC17.26■□□□□ 0.35
TUBA1AQ71U36 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TUBA1AQ71U36 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 AC124016.1-201ENST00000609552 612 ntBASIC17.25■□□□□ 0.35
TUBA1AQ71U36 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1AQ71U36 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 SIRPAP1-201ENST00000448467 1770 ntBASIC17.24■□□□□ 0.35
TUBA1AQ71U36 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1AQ71U36 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms