Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 AL450487.1-201ENST00000426799 995 ntBASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 AC104390.1-201ENST00000555663 520 ntBASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 MIR3180-4-201ENST00000582223 153 ntBASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 AC011498.5-201ENST00000592027 486 ntBASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 CLEC4GP1-201ENST00000596555 870 ntBASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 AL121672.3-201ENST00000608644 468 ntBASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 AC093525.10-201ENST00000625130 1569 ntBASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf139Q6ZV77 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 KRT8P32-201ENST00000512863 1461 ntBASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 MIR662-201ENST00000384847 95 ntBASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 MIR564-202ENST00000385049 94 ntBASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 AL136038.4-201ENST00000603606 1261 ntBASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 AL157888.1-201ENST00000631930 593 ntBASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf139Q6ZV77 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.08■□□□□ 0.01
C9orf139Q6ZV77 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
C9orf139Q6ZV77 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.08■□□□□ 0
C9orf139Q6ZV77 AL162741.1-201ENST00000565563 1558 ntBASIC15.08■□□□□ 0
C9orf139Q6ZV77 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 KRT18P23-201ENST00000435622 1283 ntBASIC15.08■□□□□ 0
C9orf139Q6ZV77 TSSC2-201ENST00000450217 709 ntBASIC15.08■□□□□ 0
C9orf139Q6ZV77 BX276092.5-203ENST00000456199 560 ntBASIC15.08■□□□□ 0
C9orf139Q6ZV77 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 AC079602.3-201ENST00000623931 403 ntBASIC15.08■□□□□ 0
C9orf139Q6ZV77 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 HCG11-201ENST00000411553 5696 ntBASIC15.08■□□□□ 0
C9orf139Q6ZV77 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.08■□□□□ 0
C9orf139Q6ZV77 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
C9orf139Q6ZV77 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms