Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 LINC00896-202ENST00000609602 2128 ntBASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 ANO7L1-203ENST00000602586 1720 ntBASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 PCDHA12-202ENST00000613593 2588 ntBASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RNF111Q6ZNA4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 KRT8P8-201ENST00000434750 1448 ntBASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF111Q6ZNA4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 AC126763.1-201ENST00000552015 2118 ntBASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF111Q6ZNA4 RARRES2P10-201ENST00000564312 460 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms