Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 TMEM191A-211ENST00000637163 1067 ntBASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 AC096733.2-201ENST00000609937 1394 ntBASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A4Q4VNC1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ATP13A4Q4VNC1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
ATP13A4Q4VNC1 AL390961.4-201ENST00000623958 2535 ntBASIC19.52■□□□□ 0.71
ATP13A4Q4VNC1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 AC008556.1-201ENST00000610908 2040 ntBASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 MFAP1P1-201ENST00000442257 1255 ntBASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 AC097488.1-201ENST00000507834 756 ntBASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 AC073592.3-201ENST00000625118 1834 ntBASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A4Q4VNC1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms