Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
TRIM71Q2Q1W2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRIM71Q2Q1W2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM71Q2Q1W2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM71Q2Q1W2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 IGHV3-47-201ENST00000425060 335 ntBASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 AC074051.2-201ENST00000565115 352 ntBASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM71Q2Q1W2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM71Q2Q1W2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM71Q2Q1W2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM71Q2Q1W2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM71Q2Q1W2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.39■□□□□ 0.86
TRIM71Q2Q1W2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM71Q2Q1W2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 LINC00167-201ENST00000530583 1419 ntBASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TRIM71Q2Q1W2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 FP475955.4-201ENST00000623131 1990 ntBASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 AP002469.2-201ENST00000531724 424 ntBASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 AC138894.3-201ENST00000603787 634 ntBASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 AL592071.1-201ENST00000611956 408 ntBASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM71Q2Q1W2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 AC106795.1-205ENST00000512851 1056 ntBASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 SLC25A6P4-201ENST00000586535 553 ntBASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 AC024563.2-201ENST00000603282 481 ntBASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms