Protein–RNA interactions for Protein: Q13616

CUL1, Cullin-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1Q13616 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CUL1Q13616 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CUL1Q13616 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.43■□□□□ 0.7
CUL1Q13616 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CUL1Q13616 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.43■□□□□ 0.7
CUL1Q13616 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CUL1Q13616 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.43■□□□□ 0.7
CUL1Q13616 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.43■□□□□ 0.7
CUL1Q13616 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.43■□□□□ 0.7
CUL1Q13616 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.43■□□□□ 0.7
CUL1Q13616 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.43■□□□□ 0.7
CUL1Q13616 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.43■□□□□ 0.7
CUL1Q13616 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CUL1Q13616 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CUL1Q13616 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.42■□□□□ 0.7
CUL1Q13616 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 TSPY23P-201ENST00000440136 739 ntBASIC19.42■□□□□ 0.7
CUL1Q13616 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.42■□□□□ 0.7
CUL1Q13616 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.42■□□□□ 0.7
CUL1Q13616 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.42■□□□□ 0.7
CUL1Q13616 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.42■□□□□ 0.7
CUL1Q13616 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CUL1Q13616 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL1Q13616 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CUL1Q13616 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.41■□□□□ 0.7
CUL1Q13616 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CUL1Q13616 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL1Q13616 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.41■□□□□ 0.7
CUL1Q13616 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CUL1Q13616 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL1Q13616 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL1Q13616 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CUL1Q13616 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL1Q13616 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.41■□□□□ 0.7
CUL1Q13616 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.41■□□□□ 0.7
CUL1Q13616 SOX15-203ENST00000570788 1093 ntBASIC19.41■□□□□ 0.7
CUL1Q13616 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.41■□□□□ 0.7
CUL1Q13616 MYC-208ENST00000641036 567 ntBASIC19.41■□□□□ 0.7
CUL1Q13616 AL499627.1-201ENST00000569373 2188 ntBASIC19.41■□□□□ 0.7
CUL1Q13616 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL1Q13616 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CUL1Q13616 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL1Q13616 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.4■□□□□ 0.7
CUL1Q13616 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.4■□□□□ 0.7
CUL1Q13616 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CUL1Q13616 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.4■□□□□ 0.7
CUL1Q13616 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL1Q13616 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.4■□□□□ 0.7
CUL1Q13616 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms