Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 IRX1P1-201ENST00000438849 1838 ntBASIC14.34□□□□□ -0.11
HIST1H1AQ02539 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 CROCCP1-201ENST00000426910 5675 ntBASIC14.33□□□□□ -0.11
HIST1H1AQ02539 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
HIST1H1AQ02539 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 AL031598.1-201ENST00000561511 1773 ntBASIC14.33□□□□□ -0.12
HIST1H1AQ02539 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 ID1-201ENST00000376105 1233 ntBASIC14.33□□□□□ -0.12
HIST1H1AQ02539 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 AC135050.7-201ENST00000624508 2218 ntBASIC14.33□□□□□ -0.12
HIST1H1AQ02539 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.33□□□□□ -0.12
HIST1H1AQ02539 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 AC090164.3-201ENST00000610780 2143 ntBASIC14.32□□□□□ -0.12
HIST1H1AQ02539 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.32□□□□□ -0.12
HIST1H1AQ02539 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 FP475955.4-201ENST00000623131 1990 ntBASIC14.32□□□□□ -0.12
HIST1H1AQ02539 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H1AQ02539 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms