Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 KRT8P3-201ENST00000519669 1449 ntBASIC18.06■□□□□ 0.48
HMGCS1Q01581 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 GCSHP5-201ENST00000443090 522 ntBASIC18.05■□□□□ 0.48
HMGCS1Q01581 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 AC026271.3-201ENST00000571884 352 ntBASIC18.05■□□□□ 0.48
HMGCS1Q01581 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS1Q01581 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.05■□□□□ 0.48
HMGCS1Q01581 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 AC130371.2-201ENST00000619443 611 ntBASIC18.04■□□□□ 0.48
HMGCS1Q01581 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 AC073592.3-201ENST00000625118 1834 ntBASIC18.04■□□□□ 0.48
HMGCS1Q01581 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCS1Q01581 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCS1Q01581 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 AL354751.1-201ENST00000412768 1863 ntBASIC18.03■□□□□ 0.48
HMGCS1Q01581 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 AL158047.1-201ENST00000445918 881 ntBASIC18.03■□□□□ 0.48
HMGCS1Q01581 FAM207BP-201ENST00000447172 505 ntBASIC18.03■□□□□ 0.48
HMGCS1Q01581 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 CKBP1-201ENST00000565489 1086 ntBASIC18.03■□□□□ 0.48
HMGCS1Q01581 MIR6786-201ENST00000616843 113 ntBASIC18.03■□□□□ 0.48
HMGCS1Q01581 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms