Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB11AP62491 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB11AP62491 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB11AP62491 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB11AP62491 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB11AP62491 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RAB11AP62491 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB11AP62491 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
RAB11AP62491 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.21■□□□□ 0.02
RAB11AP62491 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB11AP62491 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB11AP62491 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
RAB11AP62491 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RAB11AP62491 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB11AP62491 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB11AP62491 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.21■□□□□ 0.02
RAB11AP62491 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RAB11AP62491 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RAB11AP62491 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RAB11AP62491 ANO7L1-203ENST00000602586 1720 ntBASIC15.2■□□□□ 0.02
RAB11AP62491 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB11AP62491 AF201337.1-201ENST00000520239 748 ntBASIC15.2■□□□□ 0.02
RAB11AP62491 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB11AP62491 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 AC006557.6-201ENST00000623071 864 ntBASIC15.2■□□□□ 0.02
RAB11AP62491 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB11AP62491 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB11AP62491 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB11AP62491 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB11AP62491 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RAB11AP62491 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB11AP62491 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
RAB11AP62491 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB11AP62491 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB11AP62491 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 TUBB8P6-201ENST00000436895 1288 ntBASIC15.19■□□□□ 0.02
RAB11AP62491 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB11AP62491 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RAB11AP62491 AC105036.2-201ENST00000569468 176 ntBASIC15.19■□□□□ 0.02
RAB11AP62491 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB11AP62491 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB11AP62491 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB11AP62491 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RAB11AP62491 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB11AP62491 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RAB11AP62491 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB11AP62491 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB11AP62491 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB11AP62491 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB11AP62491 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB11AP62491 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB11AP62491 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB11AP62491 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms