Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP4P49662 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CASP4P49662 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.42■□□□□ 0.86
CASP4P49662 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP4P49662 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP4P49662 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP4P49662 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP4P49662 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.41■□□□□ 0.86
CASP4P49662 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP4P49662 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 SLC25A1P2-201ENST00000430693 912 ntBASIC20.41■□□□□ 0.86
CASP4P49662 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP4P49662 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CASP4P49662 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.41■□□□□ 0.86
CASP4P49662 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
CASP4P49662 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CASP4P49662 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP4P49662 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASP4P49662 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CASP4P49662 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASP4P49662 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASP4P49662 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASP4P49662 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASP4P49662 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASP4P49662 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.4■□□□□ 0.86
CASP4P49662 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CASP4P49662 AC007663.1-201ENST00000438948 1240 ntBASIC20.4■□□□□ 0.86
CASP4P49662 MCCD1P1-208ENST00000445732 328 ntBASIC20.4■□□□□ 0.86
CASP4P49662 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.4■□□□□ 0.86
CASP4P49662 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.4■□□□□ 0.86
CASP4P49662 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CASP4P49662 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.4■□□□□ 0.86
CASP4P49662 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.4■□□□□ 0.86
CASP4P49662 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CASP4P49662 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.4■□□□□ 0.86
CASP4P49662 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.4■□□□□ 0.86
CASP4P49662 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.39■□□□□ 0.86
CASP4P49662 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASP4P49662 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASP4P49662 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.39■□□□□ 0.86
CASP4P49662 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASP4P49662 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CASP4P49662 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP4P49662 TSPY14P-201ENST00000303979 915 ntBASIC20.39■□□□□ 0.85
CASP4P49662 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.39■□□□□ 0.85
CASP4P49662 NAPSB-206ENST00000562112 1266 ntBASIC20.39■□□□□ 0.85
CASP4P49662 C2orf69P3-201ENST00000565542 1120 ntBASIC20.39■□□□□ 0.85
CASP4P49662 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CASP4P49662 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.39■□□□□ 0.85
CASP4P49662 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP4P49662 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP4P49662 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CASP4P49662 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP4P49662 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP4P49662 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.38■□□□□ 0.85
CASP4P49662 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.38■□□□□ 0.85
CASP4P49662 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
CASP4P49662 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.38■□□□□ 0.85
CASP4P49662 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.38■□□□□ 0.85
CASP4P49662 TSPY17P-201ENST00000450329 467 ntBASIC20.38■□□□□ 0.85
CASP4P49662 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.38■□□□□ 0.85
CASP4P49662 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.38■□□□□ 0.85
CASP4P49662 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.38■□□□□ 0.85
CASP4P49662 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 AC090164.3-201ENST00000610780 2143 ntBASIC20.38■□□□□ 0.85
CASP4P49662 AC036111.1-201ENST00000533973 1582 ntBASIC20.38■□□□□ 0.85
CASP4P49662 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP4P49662 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CASP4P49662 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.37■□□□□ 0.85
CASP4P49662 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASP4P49662 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CASP4P49662 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.37■□□□□ 0.85
CASP4P49662 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CASP4P49662 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASP4P49662 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASP4P49662 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CASP4P49662 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.37■□□□□ 0.85
CASP4P49662 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASP4P49662 MIR564-202ENST00000385049 94 ntBASIC20.37■□□□□ 0.85
CASP4P49662 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.37■□□□□ 0.85
CASP4P49662 ECEL1P2-202ENST00000465689 757 ntBASIC20.37■□□□□ 0.85
CASP4P49662 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms