Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 ESRRAP1-201ENST00000400596 1257 ntBASIC16.97■□□□□ 0.31
CENPAP49450 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.97■□□□□ 0.31
CENPAP49450 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CENPAP49450 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.97■□□□□ 0.31
CENPAP49450 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPAP49450 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.97■□□□□ 0.31
CENPAP49450 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
CENPAP49450 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPAP49450 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPAP49450 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CENPAP49450 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
CENPAP49450 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CENPAP49450 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CENPAP49450 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.96■□□□□ 0.31
CENPAP49450 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.96■□□□□ 0.31
CENPAP49450 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.96■□□□□ 0.31
CENPAP49450 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 C1QL1P1-201ENST00000568105 661 ntBASIC16.96■□□□□ 0.31
CENPAP49450 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.96■□□□□ 0.31
CENPAP49450 HLA-A-209ENST00000638375 975 ntBASIC16.96■□□□□ 0.31
CENPAP49450 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.96■□□□□ 0.31
CENPAP49450 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
CENPAP49450 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPAP49450 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.96■□□□□ 0.3
CENPAP49450 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.96■□□□□ 0.3
CENPAP49450 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CENPAP49450 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
CENPAP49450 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CENPAP49450 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CENPAP49450 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.95■□□□□ 0.3
CENPAP49450 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.95■□□□□ 0.3
CENPAP49450 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.95■□□□□ 0.3
CENPAP49450 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CENPAP49450 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CENPAP49450 AC083906.6-201ENST00000641366 219 ntBASIC16.95■□□□□ 0.3
CENPAP49450 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.95■□□□□ 0.3
CENPAP49450 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPAP49450 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CENPAP49450 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPAP49450 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 NEFHP1-201ENST00000412845 2629 ntBASIC16.94■□□□□ 0.3
CENPAP49450 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CENPAP49450 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.94■□□□□ 0.3
CENPAP49450 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CENPAP49450 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CENPAP49450 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPAP49450 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPAP49450 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.94■□□□□ 0.3
CENPAP49450 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.94■□□□□ 0.3
CENPAP49450 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CENPAP49450 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.94■□□□□ 0.3
CENPAP49450 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.94■□□□□ 0.3
CENPAP49450 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms