Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.3■□□□□ 0.2
GDNFP39905 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.3■□□□□ 0.2
GDNFP39905 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.3■□□□□ 0.2
GDNFP39905 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.3■□□□□ 0.2
GDNFP39905 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GDNFP39905 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.3■□□□□ 0.2
GDNFP39905 AL390719.1-204ENST00000412397 1219 ntBASIC16.3■□□□□ 0.2
GDNFP39905 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.3■□□□□ 0.2
GDNFP39905 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.3■□□□□ 0.2
GDNFP39905 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.3■□□□□ 0.2
GDNFP39905 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GDNFP39905 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.3■□□□□ 0.2
GDNFP39905 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.3■□□□□ 0.2
GDNFP39905 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
GDNFP39905 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
GDNFP39905 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.3■□□□□ 0.2
GDNFP39905 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
GDNFP39905 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.29■□□□□ 0.2
GDNFP39905 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GDNFP39905 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 FEM1AP3-201ENST00000403722 1741 ntBASIC16.29■□□□□ 0.2
GDNFP39905 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GDNFP39905 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GDNFP39905 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.29■□□□□ 0.2
GDNFP39905 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.29■□□□□ 0.2
GDNFP39905 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.29■□□□□ 0.2
GDNFP39905 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.29■□□□□ 0.2
GDNFP39905 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.29■□□□□ 0.2
GDNFP39905 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GDNFP39905 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.29■□□□□ 0.2
GDNFP39905 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.29■□□□□ 0.2
GDNFP39905 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GDNFP39905 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.29■□□□□ 0.2
GDNFP39905 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
GDNFP39905 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 GNAS-203ENST00000306120 1878 ntBASIC16.29■□□□□ 0.2
GDNFP39905 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GDNFP39905 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDNFP39905 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GDNFP39905 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.28■□□□□ 0.2
GDNFP39905 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.28■□□□□ 0.2
GDNFP39905 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.28■□□□□ 0.2
GDNFP39905 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GDNFP39905 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.28■□□□□ 0.2
GDNFP39905 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.28■□□□□ 0.2
GDNFP39905 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDNFP39905 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms