Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.79■□□□□ 0.76
CTNNA1P35221 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNNA1P35221 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTNNA1P35221 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNNA1P35221 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNNA1P35221 RCC2P6-201ENST00000526625 1557 ntBASIC19.78■□□□□ 0.76
CTNNA1P35221 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CTNNA1P35221 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.78■□□□□ 0.76
CTNNA1P35221 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTNNA1P35221 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.78■□□□□ 0.76
CTNNA1P35221 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNNA1P35221 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CTNNA1P35221 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNNA1P35221 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTNNA1P35221 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNNA1P35221 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.78■□□□□ 0.76
CTNNA1P35221 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTNNA1P35221 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNNA1P35221 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTNNA1P35221 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTNNA1P35221 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTNNA1P35221 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.77■□□□□ 0.76
CTNNA1P35221 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNNA1P35221 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.77■□□□□ 0.76
CTNNA1P35221 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTNNA1P35221 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CTNNA1P35221 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNNA1P35221 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.77■□□□□ 0.76
CTNNA1P35221 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CTNNA1P35221 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNNA1P35221 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.77■□□□□ 0.76
CTNNA1P35221 AC126763.1-201ENST00000552015 2118 ntBASIC19.77■□□□□ 0.76
CTNNA1P35221 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.77■□□□□ 0.76
CTNNA1P35221 AL445675.2-201ENST00000620291 557 ntBASIC19.77■□□□□ 0.76
CTNNA1P35221 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTNNA1P35221 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.77■□□□□ 0.76
CTNNA1P35221 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.77■□□□□ 0.76
CTNNA1P35221 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNNA1P35221 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.77■□□□□ 0.76
CTNNA1P35221 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.77■□□□□ 0.76
CTNNA1P35221 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNNA1P35221 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTNNA1P35221 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTNNA1P35221 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CTNNA1P35221 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CTNNA1P35221 KRT8P11-201ENST00000409686 1436 ntBASIC19.76■□□□□ 0.75
CTNNA1P35221 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.76■□□□□ 0.75
CTNNA1P35221 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.76■□□□□ 0.75
CTNNA1P35221 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CTNNA1P35221 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.76■□□□□ 0.75
CTNNA1P35221 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.76■□□□□ 0.75
CTNNA1P35221 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.76■□□□□ 0.75
CTNNA1P35221 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.76■□□□□ 0.75
CTNNA1P35221 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.76■□□□□ 0.75
CTNNA1P35221 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 MTMR9LP-203ENST00000426597 1545 ntBASIC19.76■□□□□ 0.75
CTNNA1P35221 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTNNA1P35221 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.75■□□□□ 0.75
CTNNA1P35221 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 AC020916.1-201ENST00000587762 1774 ntBASIC19.75■□□□□ 0.75
CTNNA1P35221 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms