Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HOXC13P31276 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 AL023284.2-201ENST00000405850 579 ntBASIC19.38■□□□□ 0.69
HOXC13P31276 RCC2P3-201ENST00000418112 1537 ntBASIC19.38■□□□□ 0.69
HOXC13P31276 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXC13P31276 GPAT2P1-201ENST00000444924 1672 ntBASIC19.38■□□□□ 0.69
HOXC13P31276 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HOXC13P31276 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC13P31276 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC13P31276 AL512604.3-201ENST00000569583 964 ntBASIC19.38■□□□□ 0.69
HOXC13P31276 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC13P31276 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC13P31276 AL109659.2-201ENST00000606809 1674 ntBASIC19.38■□□□□ 0.69
HOXC13P31276 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.38■□□□□ 0.69
HOXC13P31276 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC13P31276 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HOXC13P31276 MTMR9LP-203ENST00000426597 1545 ntBASIC19.37■□□□□ 0.69
HOXC13P31276 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXC13P31276 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HOXC13P31276 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HOXC13P31276 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC13P31276 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC13P31276 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.37■□□□□ 0.69
HOXC13P31276 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC13P31276 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HOXC13P31276 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC13P31276 ZNF444P1-201ENST00000559497 298 ntBASIC19.37■□□□□ 0.69
HOXC13P31276 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC13P31276 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.37■□□□□ 0.69
HOXC13P31276 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC13P31276 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC13P31276 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC13P31276 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
HOXC13P31276 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 TNXA-203ENST00000507684 2038 ntBASIC19.37■□□□□ 0.69
HOXC13P31276 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC13P31276 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC13P31276 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC13P31276 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HOXC13P31276 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.36■□□□□ 0.69
HOXC13P31276 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC13P31276 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC13P31276 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC13P31276 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 AC092119.3-201ENST00000612618 583 ntBASIC19.36■□□□□ 0.69
HOXC13P31276 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC13P31276 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC13P31276 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC13P31276 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
HOXC13P31276 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC13P31276 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC13P31276 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
HOXC13P31276 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXC13P31276 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC13P31276 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC13P31276 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 AP000347.1-202ENST00000435868 847 ntBASIC19.35■□□□□ 0.69
HOXC13P31276 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC13P31276 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HOXC13P31276 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXC13P31276 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC13P31276 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC13P31276 LINC01311-201ENST00000565162 1445 ntBASIC19.34■□□□□ 0.69
HOXC13P31276 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HOXC13P31276 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC13P31276 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC13P31276 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC13P31276 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC13P31276 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.34■□□□□ 0.69
HOXC13P31276 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms